BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024B06LP1|AL428167
(1111 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig653 2014 0.0
>3x_Contig653
Length = 2427
Score = 2014 bits (1013), Expect = 0.0
Identities = 1089/1114 (97%), Gaps = 3/1114 (0%)
Strand = Plus / Minus
Query: 1 gatcaatcaaacgacaaacagagaagtggcctctgtgtatatcaacaaacacagtctgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1257 gatcaatcaaacgacaaacagagaagtggcctctgtgtatatcaacaaacacagtctgag 1198
Query: 61 cgcataataagagttgagatgagatgagatgagatgagatgagatgagcttgattttggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1197 cgcataataagagttgagatgagatgagatgagatgagatgagatgagcttgattttggt 1138
Query: 121 gtaaaggtagaaaatttttgtcgtttcttttcatcacgtgattaacgattatccgggtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 gtaaaggtagaaaatttttgtcgtttcttttcatcacgtgattaacgattatccgggtaa 1078
Query: 181 tgagtttgtctctctcgtttagtatttacaaaagcattctatgtagtagtgagaccaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1077 tgagtttgtctctctcgtttagtatttacaaaagcattctatgtagtagtgagaccaaga 1018
Query: 241 agcggggaatctgcttgtcacatggtttgccgagagcgttacgagccaatggacatgctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 agcggggaatctgcttgtcacatggtttgccgagagcgttacgagccaatggacatgctc 958
Query: 301 aggagtaggtaaagcgtgaaagtnagttgaatcaaaagttgcacaatgtatgthcttccc 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 957 aggagtaggtaaagcgtgaaagtaagttgaatcaaaagttgcacaatgtatgtacttccc 898
Query: 361 tcaagtatccgcctctctgcattggaatttctttactggaatcaatcccaattaaagaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 tcaagtatccgcctctctgcattggaatttctttactggaatcaatcccaattaaagaat 838
Query: 421 gttttttgggacctcgccattacccgcacaaacgacgtgcatggtggaagccaatggtgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 gttttttgggacctcgccattacccgcacaaacgacgtgcatggtggaagccaatggtgc 778
Query: 481 cattagttgccaatggtgcatgcatcaataagcattgacacacatacatatacattcttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 cattagttgccaatggtgcatgcatcaataagcattgacacacatacatatacattcttg 718
Query: 541 gggcagaaatagacgtgcatttgcatgaattgattggraactcatggtttcagatgcacc 600
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 717 gggcagaaatagacgtgcatttgcatgaattgattggaaactcatggtttcagatgcacc 658
Query: 601 agctcgaggtgaacaaggtaagttacgtattgagaacaactcttggtaaaggaatacttc 660
||||||||||||||||||||||||| ||||| | || || ||||||||||||||| ||
Sbjct: 657 agctcgaggtgaacaaggtaagttaagtattcacaaaaaatcttggtaaaggaattatta 598
Query: 661 tactatacttcttcttcttttcattgtgcatacaagagaagaggttcaagtcgagttgat 720
|| |||| || || || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 taatataattattattattttcattgtgcatacaagagaagaggttcaagtcgagttgat 538
Query: 721 tacctcgaaatacaaggtgtagttttagagggacattagggtcatagatacgaacccatt 780
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 537 tacctcgaaataaaaggtgtagttttagagggacattagggtaatagatacgaacccatt 478
Query: 781 gacctgcctaaaaataactcaaacttgtacatttcaaaagttgaataagacaaacgagat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gacctgcctaaaaataactcaaacttgtacatttcaaaagttgaataagacaaacgagat 418
Query: 841 tttctttctaagtagcgatasag-agaatatctatatattcgtaagacaatgacaattgg 899
|||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 417 tttctttctaagtagcgatagcgaagaatatctatatattcgtaagacaatgacaattgg 358
Query: 900 tatcctaatgaatggacaaaggaaacgtataaaaaaataactgcaatggcatttgtcttt 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tatcctaatgaatggacaaaggaaacgtataaaaaaataactgcaatggcatttgtcttt 298
Query: 960 gtgttttttctgattttcatcatcatttcactgaaatgaaaataaaaatagagtgctaat 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gtgttttttctgattttcatcatcatttcactgaaatgaaaataaaaatagagtgctaat 238
Query: 1020 ggtaataatggcgtgataaaagtwataagatgataaagctgatccttatgatatggg-ac 1078
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 237 ggtaataatggcgtgataaaagtaataagatgataaagctgatccttatgatatgggaac 178
Query: 1079 aatgatggsaattgacgggg-agataaagcttct 1111
|||||||| ||||||||||| |||||||||||||
Sbjct: 177 aatgatggcaattgacggggaagataaagcttct 144
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,277
Number of Sequences: 1807
Number of extensions: 11277
Number of successful extensions: 928
Number of sequences better than 1.0e-20: 1
length of query: 1111
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1095
effective length of database: 10,329,639
effective search space: 11310954705
effective search space used: 11310954705
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)